Library

2025 | Other

Learning the syntax of plant assemblages

Authors: César Leblanc, Pierre Bonnet, Alexis Joly, et al.

Status: Published

Journal: British Ecological Society

Publisher: Nature Portfolio

URL/DOI: http://dx.doi.org/10.21203/rs.3.rs-6304381/v1

2025 | Journal paper

Cooperative learning of Pl@ntNet's Artificial Intelligence algorithm: how does it work and how can we improve it?

Authors: Tanguy Lefort, Antoine Affouard, Benjamin Charlier, Jean-Christophe Lombardo, Mathias Chouet, Hervé Goëau, Joseph Salmon, Pierre Bonnet, Alexis Joly

Status: Published

Journal: Methods in Ecology and Evolution

Volume/Issue: Volume 16, Issue 2

Publisher: Wiley

URL/DOI: https://besjournals.onlinelibrary.wiley.com/doi/full/10.1111/2041-210X.14486

2025 | Other

A predictive approach to determining the joint conservation status of species | Une approche prédictive de la détermination du statut de conservation conjoint des espèces

Authors: Joaquim Estopinan

Status: Published

Journal: AGRIS - International System for Agricultural Science and Technology

Publisher: HAL CCSD

URL/DOI: https://theses.hal.science/tel-04366847v2/file/ESTOPINAN_2023_archivage.pdf

2024 | Journal paper

Towards consistently measuring and monitoring habitat condition with airborne laser scanning and unmanned aerial vehicles

Authors: W.D. Kissling, Y. Shi, J.Wang, A.Walicka, C.George, J.E. Moeslund, F. Gerard

Status: Published

Journal: Ecological Indicators

Volume/Issue: 169

Publisher: Elsevier

URL/DOI: https://doi.org/10.1016/j.ecolind.2024.112970

2024 | Journal paper

Generalization in birdsong classification: impact of transfer learning methods and dataset characteristics

Authors: Ghani B., Kalkman V. J., et al.

Status: Published

URL/DOI: https://doi.org/10.48550/arXiv.2409.15383

2024 | Other

PlantCLEF 2024 pretrained models on the flora of the south western Europe based on a subset of Pl@ntNet collaborative images and a ViT base patch 14 dinoV2

Authors: Goëau H., Lombardo J.-C., et al.

Status: Published

URL/DOI: https://doi.org/10.5281/zenodo.10848263

2024 | Other

Overview of PlantCLEF 2024: multi-species plant identification in vegetation plot images

Authors: Goëau H., Espitalier V., Bonnet P., Joly A.

Status: Published

URL/DOI: https://ird.hal.science/hal-04806900/

2024 | Journal paper

Datasets for testing the robustness of LiDAR vegetation metrics to varying point densities

Authors: Wang J., Shi Y., Kissling W. D.

Status: Published

URL/DOI: https://doi.org/10.5281/zenodo.13628041

2024 | Other

Repository of camera trap data recorded during three pilot studies of the Amsterdamse Waterleidingduinen

Authors: Evans J. C., Zilber R., Kissling W. D.

Status: Published

URL/DOI: https://doi.org/10.5281/zenodo.11440456

2024 | Journal paper

A deep-learning framework for enhancing habitat identification based on species composition

Authors: César Leblanc, Pierre Bonnet, Maximilien Servajean, Milan Chytrý, Svetlana Aćić, Olivier Argagnon, Ariel Bergamini, Idoia Biurrun, Gianmaria Bonari, Juan A. Campos, Andraž Čarni, Renata Ćušterevska, Michele De Sanctis, Jürgen Dengler, Emmanuel Garbolino, Valentin Golub, Ute Jandt, Florian Jansen, Maria Lebedeva, Jonathan Lenoir, Jesper Erenskjold Moeslund, Aaron Pérez-Haase, Remigiusz Pielech, Jozef Šibík, Zvjezdana Stančić, Angela Stanisci, Grzegorz Swacha, Domas Uogintas, Kiril Vassilev, Thomas Wohlgemuth, Alexis Joly

Status: Published

Journal: Applied Vegetation Science

Volume/Issue: 27/3

Publisher: IAVS

URL/DOI: https://doi.org/10.1111/avsc.12802

2024 | Proceedings paper

MALPOLON: A Framework for Deep Species Distribution Modeling

Authors: Theo Larcher, Lukas Picek, Benjamin Deneu, Titouan Lorieul, Maximilien Servajean, Alexis Joly

Status: Published

Journal: Machine Vision for Earth Observation

URL/DOI: https://bmva-archive.org.uk/bmvc/2024/workshops/MVEO/paper2.pdf

2024 | Proceedings paper

Overview of LifeCLEF 2024: Challenges on Species Distribution Prediction and Identification

Authors: Alexis Joly, Lukáš Picek, Stefan Kahl, Hervé Goëau, Vincent Espitalier, Christophe Botella, Diego Marcos, Joaquim Estopinan, Cesar Leblanc, Théo Larcher, Milan Šulc, Marek Hrúz, Maximilien Servajean, Hervé Glotin, Robert Planqué, Willem-Pier Vellinga, Holger Klinck, Tom Denton, Ivan Eggel, Pierre Bonnet, Henning Müller

Status: Published

Journal: Experimental IR Meets Multilinguality, Multimodality, and Interaction

Publisher: Springer

URL/DOI: https://link.springer.com/chapter/10.1007/978-3-031-71908-0_9

2024 | Proceedings paper

AI Species Identification Using Image and Sound Recognition for Citizen Science, Collection Management and Biomonitoring: From Training Pipeline to Large-Scale Models

Authors: Laurens Hogeweg, Ni Yan, Django Brunink, Khadija Ezzaki-Chokri, Wilfred Gerritsen, Rita Pucci, Burooj Ghani, Dan Stowell, Vincent J. Kalkman

Status: Published

Proceedings: Biodiversity Information Standards (TDWG)

Volume/Issue: 2024

Publisher: Pensoft Publishers

URL/DOI: https://doi.org/10.3897/biss.8.136839

2024 | Deliverable

D2.3 Deliver framework and its technical implementation of MAMBO tools and technology supporting EU Pollinator Initiative

Authors: Ana Maria Feijoo Quezada, Koos Biesmeijer, Niels Raes

Status: Subject to change

Deliverable number: D2.3

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2024 | Other

GeoPlant: Spatial Plant Species Prediction Dataset

Authors: Lukas Picek, Christophe Botella, Maximilien Servajean, César Leblanc, Rémi Palard, Théo Larcher, Benjamin Deneu, Diego Marcos, Pierre Bonnet, Alexis Joly

Status: Published

URL/DOI: https://arxiv.org/abs/2408.13928